HPV Target gene Detail Information

> ASIC2 Gene Search Result


Gene Information
Gene Name ASIC2
Gene ID 40
Gene Full Name acid sensing ion channel subunit 2
Gene Alias ACCN|ACCN1|ASIC2a|BNC1|BNaC1|MDEG|hBNaC1
Transcripts ENSG00000108684
Virus HPV
Gene Type protein-coding
HPA Location Info
Membrane Info Plasma proteins, Predicted membrane proteins
Uniport_ID Q16515
HGNC ID HGNC:99
OMIM ID 601784
Summary This gene encodes a member of the degenerin/epithelial sodium channel (DEG/ENaC) superfamily. The members of this family are amiloride-sensitive sodium channels that contain intracellular N and C termini, 2 hydrophobic transmembrane regions, and a large extracellular loop, which has many cysteine residues with conserved spacing. The member encoded by this gene may play a role in neurotransmission. In addition, a heteromeric association between this member and acid-sensing (proton-gated) ion channel 3 has been observed to co-assemble into proton-gated channels sensitive to gadolinium. Alternative splicing has been observed at this locus and two variants, encoding distinct isoforms, have been identified. [provided by RefSeq, Feb 2012]
Target gene [ASIC2] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5001014 chr17 39 16 4 59 View
5001015 chr17 39 16 4 59 View
5001042 chr17 36 16 4 56 View
5001219 chr17 25 11 7 43 View
5001220 chr17 25 11 7 43 View
5001266 chr17 26 8 7 41 View
5001339 chr17 22 6 10 38 View
5001412 chr17 31 4 0 35 View
5002513 chr17 7 3 0 10 View
5003373 chr17 3 1 0 4 View
5003579 chr17 3 0 0 3 View
5003580 chr17 3 0 0 3 View
5003581 chr17 2 1 0 3 View
5003604 chr17 3 0 0 3 View
5004212 chr17 1 0 0 1 View
5009113 chr17 4 0 0 4 View
5012027 chr17 24 0 0 24 View
5015157 chr17 8 7 98 113 View

Target gene [ASIC2] related to Omics data
Data ID Experiment type Sample number Platform
GSE169622 Methylation profiling (Array) 9 Infinium MethylationEPIC
GSE181805 Expression array 25 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE196215 RNA-seq 8 Illumina NovaSeq 6000 (Homo sapiens)
GSE138080 Expression array 35 Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Feature Number version)
GSE140662 Expression array 8 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
C
  GSE143026
ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)
E
  TCGA_CESC
DNA methylation sequencing;RNA-seq 288 TCGA
GSE51993 Expression array 48 Illumina Human v2 MicroRNA expression beadchip;Illumina HumanHT-12 V4.0 expression beadchip
GSE165883 RNA-seq 20 Illumina NextSeq 500 (Homo sapiens)


When the query gene is differentially changed in the dataset, a volcano/bar plot will be displayed.


> Dataset: TCGA_CESC - ASIC2 expression across samples

Volcano Plot


Bar Plot