HIV Target gene Detail Information

> EYA3 Gene Search Result


Gene Information
Gene Name EYA3
Gene ID 2140
Gene Full Name EYA transcriptional coactivator and phosphatase 3
Gene Alias -
Transcripts ENSG00000158161
Virus HIV
Gene Type protein-coding
HPA Location Info Nucleoplasm;
Membrane Info Enzymes, Predicted intracellular proteins
Uniport_ID Q99504
HGNC ID HGNC:3521
OMIM ID 601655
Summary This gene encodes a member of the eyes absent (EYA) family of proteins. The encoded protein may act as a transcriptional activator and have a role during development. It can act as a mediator of chemoresistance and cell survival in Ewing sarcoma cells, where this gene is up-regulated via a micro-RNA that binds to the 3' UTR of the transcript. A similar protein in mice acts as a transcriptional activator. Alternative splicing of this gene results in multiple transcript variants. [provided by RefSeq, Sep 2013]
Target gene [EYA3] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4000609 chr1 237 23 83 343 View
4000765 chr1 177 35 75 287 View
4001936 chr1 95 19 8 122 View
4004880 chr1 17 17 4 38 View
4006175 chr1 21 4 1 26 View
4006773 chr1 10 13 0 23 View
4007228 chr1 18 2 0 20 View
4009309 chr1 7 1 4 12 View
4010019 chr1 4 6 0 10 View
4010020 chr1 6 4 0 10 View
4014290 chr1 0 2 0 2 View
4014657 chr1 2 0 0 2 View
4014658 chr1 0 2 0 2 View
4017042 chr1 0 1 0 1 View

Target gene [EYA3] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE221688 		Chip-seq;scATAC-Seq;scRNA-Seq 12 Illumina NovaSeq 6000 (Homo sapiens)
GSE99737 RNA-seq 9 Illumina HiSeq 2500 (Homo sapiens)
GSE144332 RNA-seq 75 NextSeq 550 (Homo sapiens)
C
  GSE165705 		Chip-seq 30 Illumina NovaSeq 6000 (Homo sapiens)
GSE164264 RNA-seq 6 BGISEQ-500 (Homo sapiens)
C
  GSE30738 		Chip-seq 2 Illumina Genome Analyzer II (Homo sapiens)
GSE262621 RNA-seq 70 Illumina NovaSeq 6000 (Homo sapiens)
GSE128121 RNA-seq 16 Illumina HiSeq 4000 (Homo sapiens)
GSE162914 RNA-seq 211 Illumina HiSeq 2500 (Homo sapiens)
GSE279982 Methylation profiling (Array) 576 Infinium MethylationEPIC
C
  GSE144329 		ATAC-seq 96 NextSeq 550 (Homo sapiens)
GSE205204 RNA-seq 14 Illumina NovaSeq 6000 (Homo sapiens)
GSE125686 RNA-seq 62 Illumina HiSeq 2000 (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens);Illumina NextSeq 500 (Homo sapiens)
C
  GSE220859 		Chip-seq 11 Illumina NovaSeq 6000 (Homo sapiens)
GSE165708 RNA-seq 100 Illumina HiSeq 4000 (Homo sapiens)
C
  GSE211651 		Chip-seq;RNA-seq;PRO-seq 39 Illumina NextSeq 500 (Homo sapiens);Illumina NovaSeq 6000 (Homo sapiens)
GSE68028 MeDIP-chip 1 NimbleGen Human DNA Methylation 2.1M Deluxe Promoter Array [100929_HG19_Deluxe_Prom_Meth_HX1]
C
  GSE100376 		ATAC-seq 24 Illumina NextSeq 500 (Homo sapiens)
GSE167211 RNA-seq 1 Illumina HiSeq 2000 (Homo sapiens)
GSE165132 RNA-seq 56 NextSeq 550 (Homo sapiens)
C
  GSE100266 		ATAC-seq;Chip-seq;RNA-seq 32 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE165703 		ATAC-seq 82 Illumina HiSeq 4000 (Homo sapiens)
GSE246082 RNA-seq 6 Illumina HiSeq 4000 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE221688 - EYA3 peak across samples

Peak Plot

> Dataset: GSE165705 - EYA3 peak across samples

Peak Plot

> Dataset: GSE30738 - EYA3 peak across samples

Peak Plot

> Dataset: GSE144329 - EYA3 peak across samples

Peak Plot

> Dataset: GSE220859 - EYA3 peak across samples

Peak Plot

> Dataset: GSE211651 - EYA3 peak across samples

Peak Plot

> Dataset: GSE100376 - EYA3 peak across samples

Peak Plot

> Dataset: GSE100266 - EYA3 peak across samples

Peak Plot

> Dataset: GSE165703 - EYA3 peak across samples

Peak Plot