HTLV1 Target gene Detail Information

> FAM120C Gene Search Result


Gene Information
Gene Name FAM120C
Gene ID 54954
Gene Full Name family with sequence similarity 120 member C
Gene Alias CXorf17|ORF34
Transcripts ENSG00000184083
Virus HTLV1
Gene Type protein-coding
HPA Location Info Nuclear membrane;Endoplasmic reticulum;
Membrane Info Predicted intracellular proteins
Uniport_ID Q9NX05
HGNC ID HGNC:16949
OMIM ID 300741
Summary This gene encodes a potential transmembrane protein and lies in a region where mutations and deletions have been associated with intellectual disability and autism. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Aug 2011]
Target gene [FAM120C] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6029245 chrX 1 0 0 1 View

Target gene [FAM120C] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - FAM120C peak across samples

Peak Plot