HTLV1 Target gene Detail Information

> FAM20A Gene Search Result


Gene Information
Gene Name FAM20A
Gene ID 54757
Gene Full Name FAM20A golgi associated secretory pathway pseudokinase
Gene Alias AI1G|AIGFS|FP2747
Transcripts ENSG00000108950
Virus HTLV1
Gene Type protein-coding
HPA Location Info Secreted in other tissues;
Membrane Info Disease related genes, Human disease related genes, Predicted intracellular proteins, Predicted secreted proteins
Uniport_ID Q96MK3
HGNC ID HGNC:23015
OMIM ID 611062
Summary This locus encodes a protein that is likely secreted and may function in hematopoiesis. A mutation at this locus has been associated with amelogenesis imperfecta and gingival hyperplasia syndrome. Alternatively spliced transcript variants have been identified. [provided by RefSeq, Aug 2011]
Target gene [FAM20A] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6004114 chr17 22 28 78 128 View
6005728 chr17 66 9 6 81 View

Target gene [FAM20A] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - FAM20A peak across samples

Peak Plot