HTLV1 Target gene Detail Information

> FAT4 Gene Search Result


Gene Information
Gene Name FAT4
Gene ID 79633
Gene Full Name FAT atypical cadherin 4
Gene Alias CDHF14|CDHR11|FAT-J|FATJ|HKLLS2|NBLA00548|VMLDS2
Transcripts ENSG00000196159
Virus HTLV1
Gene Type protein-coding
HPA Location Info Cytosol;
Membrane Info Cancer-related genes, Disease related genes, Human disease related genes, Predicted membrane proteins
Uniport_ID Q6V0I7
HGNC ID HGNC:23109
OMIM ID 612411
Summary The protein encoded by this gene is a member of the protocadherin family. This gene may play a role in regulating planar cell polarity (PCP). Studies in mice suggest that loss of PCP signaling may cause cystic kidney disease, and mutations in this gene have been associated with Van Maldergem Syndrome 2. Alternatively spliced transcript variants have been noted for this gene. [provided by RefSeq, Mar 2014]
Target gene [FAT4] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6022291 chr4 5 0 0 5 View
6026806 chr4 2 0 0 2 View
6028410 chr4 0 1 0 1 View

Target gene [FAT4] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE94732
Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - FAT4 peak across samples

Peak Plot