Gene Information
|
Gene Name
|
FGGY |
|
Gene ID
|
55277
|
|
Gene Full Name
|
FGGY carbohydrate kinase domain containing |
|
Gene Alias
|
- |
|
Transcripts
|
ENSG00000172456
|
|
Virus
|
HTLV1 |
|
Gene Type
|
protein-coding |
|
HPA Location Info
|
Nucleoplasm;Nuclear bodies; 
|
|
Membrane Info
|
Disease related genes, Enzymes, Metabolic proteins, Potential drug targets, Predicted intracellular proteins |
|
Uniport_ID
|
Q96C11
|
|
HGNC ID
|
HGNC:25610
|
|
OMIM ID
|
611370 |
|
Summary
|
This gene encodes a protein that phosphorylates carbohydrates such as ribulose, ribitol, and L-arabinitol. Genome-wide association studies in some populations have found an association between polymorphisms in this gene and sporadic amyotrophic lateral sclerosis, but studies of other populations have not been able to replicate this association. Alternative splicing results in multiple transcript variants. [provided by RefSeq, May 2013] |
Target gene [FGGY] related to VISs 
Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section
| DVID |
Chromosome |
HM |
TFBS |
CA |
Sum of Overlapped Records |
Detail |
| 6001468 |
chr1 |
293 |
93 |
35 |
421 |
View |
| 6008797 |
chr1 |
18 |
19 |
5 |
42 |
View |
| 6009362 |
chr1 |
28 |
9 |
0 |
37 |
View |
| 6020295 |
chr1 |
7 |
0 |
0 |
7 |
View |
| 6024254 |
chr1 |
3 |
0 |
0 |
3 |
View |
Target gene [FGGY] related to Omics data
| Data ID |
Experiment type |
Sample number |
Platform |
|
GSE189602
|
Methylation profiling (Array) |
4 |
Infinium MethylationEPIC |
|
C GSE94732
|
Chip-seq |
24 |
Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens) |
|
GSE52244
|
Expression array |
15 |
[HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version] |
|
GSE10789
|
Expression array |
6 |
NCI/ATC Hs-OperonV3 |
|
GSE224047
|
RNA-seq |
10 |
Illumina NextSeq 500 (Homo sapiens) |
|
GSE168557
|
Expression array |
6 |
Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version) |
|
GSE136189
|
Methylation profiling (Array) |
40 |
Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip |
When the gene can detect a peak in the dataset, a peak plot will be displayed.
> Dataset: GSE94732 - FGGY peak across samples
|
Peak Plot
|
|
|
HTLV1 Target gene Detail Information
