HPV Target gene Detail Information

> FLNB Gene Search Result


Gene Information
Gene Name FLNB
Gene ID 2317
Gene Full Name filamin B
Gene Alias ABP-278|ABP-280|AOI|FH1|FLN-B|FLN1L|LRS1|SCT|TABP|TAP
Transcripts ENSG00000136068
Virus HPV
Gene Type protein-coding
HPA Location Info Plasma membrane;Golgi apparatus, Actin filaments, Cytosol;
Membrane Info Disease related genes, Human disease related genes, Plasma proteins, Potential drug targets, Predicted intracellular proteins, Transporters
Uniport_ID O75369
HGNC ID HGNC:3755
OMIM ID 603381
Summary This gene encodes a member of the filamin family. The encoded protein interacts with glycoprotein Ib alpha as part of the process to repair vascular injuries. The platelet glycoprotein Ib complex includes glycoprotein Ib alpha, and it binds the actin cytoskeleton. Mutations in this gene have been found in several conditions: atelosteogenesis type 1 and type 3; boomerang dysplasia; autosomal dominant Larsen syndrome; and spondylocarpotarsal synostosis syndrome. Multiple alternatively spliced transcript variants that encode different protein isoforms have been described for this gene. [provided by RefSeq, Nov 2009]
Target gene [FLNB] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5006593 chr3 32 133 10 175 View
5013406 chr3 33 16 1 50 View
5013407 chr3 33 16 1 50 View
5013408 chr3 33 16 1 50 View
5013409 chr3 846 159 7 1012 View
5013410 chr3 838 156 6 1000 View
5013411 chr3 97 8 0 105 View
5013412 chr3 97 8 0 105 View
5013413 chr3 141 17 41 199 View
5013414 chr3 49 2 0 51 View
5013415 chr3 46 3 0 49 View

Target gene [FLNB] related to Omics data
Data ID Experiment type Sample number Platform
GSE169622 Methylation profiling (Array) 9 Infinium MethylationEPIC
GSE181805 Expression array 25 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE197461 scRNA-seq 16 Illumina NovaSeq 6000 (Homo sapiens)
GSE55550 Expression array 155 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Probe Name version)
GSE199029 Variation;RNA-seq 44 NanoString Human nCounter PanCancer IO360 Panel
GSE165883 RNA-seq 20 Illumina NextSeq 500 (Homo sapiens)
C
  GSE183048
Chip-seq 24 Illumina HiSeq 4000 (Homo sapiens)
S
  GSE226620
scRNA-seq 30 HiSeq X Ten (Homo sapiens)
GSE40774 Expression array 134 Agilent-026652 Whole Human Genome Microarray 4x44K v2 (Probe Name version)
GSE139324 scRNA-seq 63 Illumina NextSeq 500 (Homo sapiens)
GSE138080 Expression array 35 Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Feature Number version)
GSE140662 Expression array 8 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE65858 Expression array 270 Illumina HumanHT-12 V4.0 expression beadchip
GSE196215 RNA-seq 8 Illumina NovaSeq 6000 (Homo sapiens)
C
  GSE143026
ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)
GSE51993 Expression array 48 Illumina Human v2 MicroRNA expression beadchip;Illumina HumanHT-12 V4.0 expression beadchip
S
  GSE164690
scRNA-seq 51 Illumina NextSeq 500 (Homo sapiens)
GSE55542 Expression array 36 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Probe Name version)
E
  TCGA_CESC
DNA methylation sequencing;RNA-seq 288 TCGA


When the query gene is differentially changed in the dataset, a volcano/bar plot will be displayed.


> Dataset: TCGA_CESC - FLNB expression across samples

Volcano Plot


Bar Plot