HTLV1 Target gene Detail Information

> FNDC3A Gene Search Result


Gene Information
Gene Name FNDC3A
Gene ID 22862
Gene Full Name fibronectin type III domain containing 3A
Gene Alias FNDC3|HUGO|bA203I16.1|bA203I16.5
Transcripts ENSG00000102531
Virus HTLV1
Gene Type protein-coding
HPA Location Info Nucleoplasm, Golgi apparatus, Centrosome;Cytosol;
Membrane Info Plasma proteins, Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID Q9Y2H6
HGNC ID HGNC:20296
OMIM ID 615794
Summary Enables RNA binding activity. Predicted to be involved in spermatid development. Predicted to act upstream of or within Sertoli cell development; cell-cell adhesion; and fertilization. Located in Golgi apparatus. [provided by Alliance of Genome Resources, Apr 2025]
Target gene [FNDC3A] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6004548 chr13 112 0 0 112 View
6005782 chr13 25 30 26 81 View
6018837 chr13 7 1 0 8 View
6018847 chr13 7 1 0 8 View
6018861 chr13 7 1 0 8 View
6032069 chr13 0 0 0 0 View

Target gene [FNDC3A] related to Omics data
Data ID Experiment type Sample number Platform
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE19080 Expression array 38 Homo sapiens 3K Immunoarray2 HTLV-1 JH
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - FNDC3A peak across samples

Peak Plot