HTLV1 Target gene Detail Information

> FOXP1 Gene Search Result


Gene Information
Gene Name FOXP1
Gene ID 27086
Gene Full Name forkhead box P1
Gene Alias 12CC4|HSPC215|MFH|QRF1|hFKH1B
Transcripts ENSG00000114861
Virus HTLV1
Gene Type protein-coding
HPA Location Info Nucleoplasm;
Membrane Info Cancer-related genes, Disease related genes, Plasma proteins, Predicted intracellular proteins, Transcription factors
Uniport_ID Q9H334
HGNC ID HGNC:3823
OMIM ID 605515
Summary This gene belongs to subfamily P of the forkhead box (FOX) transcription factor family. Forkhead box transcription factors play important roles in the regulation of tissue- and cell type-specific gene transcription during both development and adulthood. Forkhead box P1 protein contains both DNA-binding- and protein-protein binding-domains. This gene may act as a tumor suppressor as it is lost in several tumor types and maps to a chromosomal region (3p14.1) reported to contain a tumor suppressor gene(s). Alternative splicing results in multiple transcript variants encoding different isoforms. [provided by RefSeq, Jul 2008]
Target gene [FOXP1] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6003876 chr3 136 2 0 138 View
6008312 chr3 1 39 6 46 View
6012640 chr3 10 1 11 22 View
6018116 chr3 9 0 0 9 View
6024758 chr3 1 2 0 3 View
6027935 chr3 0 1 0 1 View
6027968 chr3 0 1 0 1 View
6033799 chr3 303 397 314 1014 View
6033800 chr3 201 29 36 266 View
6033801 chr3 53 23 45 121 View

Target gene [FOXP1] related to Omics data
Data ID Experiment type Sample number Platform
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
C
  GSE94732
Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
E
  GSE19080
Expression array 38 Homo sapiens 3K Immunoarray2 HTLV-1 JH
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the query gene is differentially changed in the dataset, a volcano/bar plot will be displayed.


> Dataset: GSE19080 - FOXP1 expression across samples

Volcano Plot


Bar Plot