HTLV1 Target gene Detail Information

> FREM3 Gene Search Result


Gene Information
Gene Name FREM3
Gene ID 166752
Gene Full Name FRAS1 related extracellular matrix 3
Gene Alias -
Transcripts ENSG00000183090
Virus HTLV1
Gene Type protein-coding
HPA Location Info Secreted to extracellular matrix;
Membrane Info Predicted secreted proteins
Uniport_ID P0C091
HGNC ID HGNC:25172
OMIM ID 608946
Summary This gene encodes an integral membrane protein containing numerous CSPG (chondroitin sulfate proteoglycan element) repeats and Calx-beta domains. The protein belongs to the family of FRAS1/FREM extracellular matrix proteins and may play a role cell adhesion. [provided by RefSeq, Feb 2017]
Target gene [FREM3] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6007212 chr4 55 3 0 58 View
6033826 chr4 0 0 0 0 View
6033827 chr4 1 9 0 10 View

Target gene [FREM3] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - FREM3 peak across samples

Peak Plot