HTLV1 Target gene Detail Information

> FRMD3 Gene Search Result


Gene Information
Gene Name FRMD3
Gene ID 257019
Gene Full Name FERM domain containing 3
Gene Alias 4.1O|EPB41L4O|EPB41LO|P410
Transcripts ENSG00000172159
Virus HTLV1
Gene Type protein-coding
HPA Location Info Golgi apparatus;Plasma membrane;
Membrane Info Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID A2A2Y4
HGNC ID HGNC:24125
OMIM ID 607619
Summary The protein encoded by this gene is a single pass membrane protein primarily found in ovaries. A similar protein in erythrocytes helps determine the shape of red blood cells, but the function of the encoded protein has not been determined. There is some evidence that this is a tumor suppressor gene, and there is also evidence linking defects in this gene to susceptibility to diabetic nephropathy in type 1 diabetes. Several transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Oct 2011]
Target gene [FRMD3] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6000701 chr9 671 208 82 961 View
6004446 chr9 113 2 0 115 View
6016702 chr9 10 2 0 12 View
6026383 chr9 2 0 0 2 View
6032042 chr9 0 0 0 0 View
6033099 chr9 0 0 0 0 View

Target gene [FRMD3] related to Omics data
Data ID Experiment type Sample number Platform
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
C
  GSE94732
Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - FRMD3 peak across samples

Peak Plot