HPV Target gene Detail Information

> HGH1 Gene Search Result


Gene Information
Gene Name HGH1
Gene ID 51236
Gene Full Name HGH1 homolog
Gene Alias BRP16|BRP16L|C8orf30A|C8orf30B|FAM203A|FAM203B
Transcripts ENSG00000235173
Virus HPV
Gene Type protein-coding
HPA Location Info Nuclear bodies, Cytosol;Nucleoplasm;
Membrane Info Predicted intracellular proteins
Uniport_ID Q9BTY7
HGNC ID HGNC:24161
OMIM ID 620684
Target gene [HGH1] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5014462 chr8 198 12 0 210 View
5014463 chr8 197 12 0 209 View
5014464 chr8 193 12 0 205 View
5014465 chr8 193 11 0 204 View
5014466 chr8 193 11 0 204 View
5014467 chr8 193 11 0 204 View
5014468 chr8 193 11 0 204 View
5014469 chr8 193 11 0 204 View
5014470 chr8 192 11 0 203 View
5014471 chr8 191 11 0 202 View
5014472 chr8 191 11 0 202 View
5014473 chr8 189 12 0 201 View
5014474 chr8 188 12 0 200 View
5014475 chr8 188 12 0 200 View
5014476 chr8 186 12 0 198 View
5014477 chr8 186 12 0 198 View
5014478 chr8 187 12 0 199 View
5014479 chr8 186 12 0 198 View
5014480 chr8 185 13 0 198 View
5014481 chr8 183 13 0 196 View
5014482 chr8 179 13 0 192 View
5014483 chr8 179 13 0 192 View
5014488 chr8 10466 10672 2279 23417 View
5014489 chr8 10466 10672 2279 23417 View
5014490 chr8 10466 10672 2279 23417 View
5014491 chr8 10466 10672 2279 23417 View
5014492 chr8 10466 10672 2279 23417 View
5014493 chr8 10466 10672 2279 23417 View

Target gene [HGH1] related to Omics data
Data ID Experiment type Sample number Platform
GSE181805 Expression array 25 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE196215 RNA-seq 8 Illumina NovaSeq 6000 (Homo sapiens)
GSE138080 Expression array 35 Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Feature Number version)
GSE140662 Expression array 8 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
C
  GSE143026 		ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)
TCGA_CESC DNA methylation sequencing;RNA-seq 288 TCGA
GSE51993 Expression array 48 Illumina Human v2 MicroRNA expression beadchip;Illumina HumanHT-12 V4.0 expression beadchip
GSE165883 RNA-seq 20 Illumina NextSeq 500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE143026 - HGH1 peak across samples

Peak Plot