HPV Target gene Detail Information

> HS3ST4 Gene Search Result


Gene Information
Gene Name HS3ST4
Gene ID 9951
Gene Full Name heparan sulfate-glucosamine 3-sulfotransferase 4
Gene Alias 3-OST-4|30ST4|3OST4|h3-OST-4
Transcripts ENSG00000182601
Virus HPV
Gene Type protein-coding
HPA Location Info
Membrane Info Enzymes, Metabolic proteins, Predicted membrane proteins
Uniport_ID Q9Y661
HGNC ID HGNC:5200
OMIM ID 604059
Summary This gene encodes the enzyme heparan sulfate D-glucosaminyl 3-O-sulfotransferase 4. This enzyme generates 3-O-sulfated glucosaminyl residues in heparan sulfate. Cell surface heparan sulfate is used as a receptor by herpes simplex virus type 1 (HSV-1), and expression of this gene is thought to play a role in HSV-1 pathogenesis. [provided by RefSeq, Jul 2008]
Target gene [HS3ST4] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5002198 chr16 8 4 2 14 View
5002312 chr16 9 0 3 12 View
5003929 chr16 1 0 0 1 View
5004818 chr16 0 2 0 2 View
5004849 chr16 3 0 0 3 View
5005366 chr16 1 5 0 6 View
5010525 chr16 13 7 2 22 View
5010838 chr16 36 40 9 85 View

Target gene [HS3ST4] related to Omics data
Data ID Experiment type Sample number Platform
GSE169622 Methylation profiling (Array) 9 Infinium MethylationEPIC
GSE181805 Expression array 25 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE196215 RNA-seq 8 Illumina NovaSeq 6000 (Homo sapiens)
GSE140662 Expression array 8 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
E
  GSE55542 		Expression array 36 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Probe Name version)
C
  GSE143026 		ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)
TCGA_CESC DNA methylation sequencing;RNA-seq 288 TCGA
E
  GSE55550 		Expression array 155 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Probe Name version)
GSE165883 RNA-seq 20 Illumina NextSeq 500 (Homo sapiens)


When the query gene is differentially changed in the dataset, a volcano/bar plot will be displayed.


> Dataset: GSE55542 - HS3ST4 expression across samples

Volcano Plot

Bar Plot

> Dataset: GSE55550 - HS3ST4 expression across samples

Volcano Plot

Bar Plot