HTLV1 Target gene Detail Information

> PATJ Gene Search Result


Gene Information
Gene Name PATJ
Gene ID 10207
Gene Full Name PATJ crumbs cell polarity complex component
Gene Alias Cipp|INADL|InaD-like|hINADL
Transcripts ENSG00000132849
Virus HTLV1
Gene Type protein-coding
HPA Location Info Cell Junctions;Centriolar satellite, Cytosol;
Membrane Info Predicted intracellular proteins
Uniport_ID Q8NI35
HGNC ID HGNC:28881
OMIM ID 603199
Summary This gene encodes a protein with multiple PDZ domains. PDZ domains mediate protein-protein interactions, and proteins with multiple PDZ domains often organize multimeric complexes at the plasma membrane. This protein localizes to tight junctions and to the apical membrane of epithelial cells. A similar protein in Drosophila is a scaffolding protein which tethers several members of a multimeric signaling complex in photoreceptors. [provided by RefSeq, Jul 2008]
Target gene [PATJ] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6023266 chr1 2 2 0 4 View

Target gene [PATJ] related to Omics data
Data ID Experiment type Sample number Platform
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
C
  GSE94732
Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - PATJ peak across samples

Peak Plot