HPV Target gene Detail Information

> PLPPR1 Gene Search Result


Gene Information
Gene Name PLPPR1
Gene ID 54886
Gene Full Name phospholipid phosphatase related 1
Gene Alias LPPR1|PRG-3|PRG3
Transcripts ENSG00000148123
Virus HPV
Gene Type protein-coding
HPA Location Info Nucleoplasm;
Membrane Info Predicted membrane proteins
Uniport_ID Q8TBJ4
HGNC ID HGNC:25993
OMIM ID 619590
Summary This gene encodes a member of the plasticity-related gene (PRG) family. Members of the PRG family mediate lipid phosphate phosphatase activity in neurons and are known to be involved in neuronal plasticity. The protein encoded by this gene does not perform its function through enzymatic phospholipid degradation. This gene is strongly expressed in brain. It shows dynamic expression regulation during brain development and neuronal excitation. Alternatively spliced transcript variants encoding the same protein have been observed. [provided by RefSeq, Jul 2008]
Target gene [PLPPR1] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5005225 chr9 28 4 10 42 View
5011134 chr9 1 1 0 2 View
5016483 chr9 1 0 0 1 View
5016484 chr9 0 0 0 0 View

Target gene [PLPPR1] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE183048 		Chip-seq 24 Illumina HiSeq 4000 (Homo sapiens)
GSE65858 Expression array 270 Illumina HumanHT-12 V4.0 expression beadchip
GSE181805 Expression array 25 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE140662 Expression array 8 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
C
  GSE143026 		ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)
E
  TCGA_CESC 		DNA methylation sequencing;RNA-seq 288 TCGA
GSE51993 Expression array 48 Illumina Human v2 MicroRNA expression beadchip;Illumina HumanHT-12 V4.0 expression beadchip


When the query gene is differentially changed in the dataset, a volcano/bar plot will be displayed.


> Dataset: TCGA_CESC - PLPPR1 expression across samples

Volcano Plot

Bar Plot