HTLV1 Target gene Detail Information

> PREX1 Gene Search Result


Gene Information
Gene Name PREX1
Gene ID 57580
Gene Full Name phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1
Gene Alias P-REX1
Transcripts ENSG00000124126
Virus HTLV1
Gene Type protein-coding
HPA Location Info Vesicles, Cytosol;
Membrane Info Predicted intracellular proteins
Uniport_ID Q8TCU6
HGNC ID HGNC:32594
OMIM ID 606905
Summary The protein encoded by this gene acts as a guanine nucleotide exchange factor for the RHO family of small GTP-binding proteins (RACs). It has been shown to bind to and activate RAC1 by exchanging bound GDP for free GTP. The encoded protein, which is found mainly in the cytoplasm, is activated by phosphatidylinositol-3,4,5-trisphosphate and the beta-gamma subunits of heterotrimeric G proteins. [provided by RefSeq, Jul 2008]
Target gene [PREX1] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6001920 chr20 257 42 16 315 View
6003006 chr20 81 108 2 191 View
6003674 chr20 140 4 3 147 View
6007814 chr20 8 40 3 51 View
6014909 chr20 6 6 3 15 View

Target gene [PREX1] related to Omics data
Data ID Experiment type Sample number Platform
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
C
  GSE94732
Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - PREX1 peak across samples

Peak Plot