HBV Target gene Detail Information

> VIT Gene Search Result

Gene Information

Gene Name	VIT
Gene ID	5212
Gene Full Name	vitrin
Gene Alias	VIT1
Transcripts	ENSG00000205221
Virus	HBV
Gene Type	protein-coding
HPA Location Info	Secreted to extracellular matrix;
Membrane Info	Predicted intracellular proteins, Predicted secreted proteins
Uniport_ID	Q6UXI7
HGNC ID	HGNC:12697
OMIM ID	617693
Summary	This gene encodes an extracellular matrix (ECM) protein. The protein may be associated with cell adhesion and migration. High levels of expression of the protein in specific parts of the brain suggest its likely role in neural development. [provided by RefSeq, Jun 2016]

Target gene [VIT] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
1013019	chr2	5	0	0	5	View
1042478	chr2	3	1	1	5	View

Target gene [VIT] related to Omics data

Data ID	Experiment type	Sample number	Platform
GSE236281	RNA-seq	12	Illumina MiSeq (Homo sapiens)
C GSE35465	Chip-seq;RNA-seq	6	Illumina HiSeq 2000 (Homo sapiens)
C GSE68402	Chip-seq	26	Illumina MiSeq (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens)
TCGA_LIHC_HBV	DNA methylation sequencing;RNA-seq	97	TCGA
C GSE270130	Chip-seq	27	Illumina NovaSeq 6000 (Homo sapiens)
GSE224901	RNA-seq	21	Illumina NovaSeq 6000 (Homo sapiens)
C GSE100400	Chip-seq;RNA-seq;4C_cccDNA	31	Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)
GSE173897	RNA-seq	95	Illumina HiSeq 4000 (Homo sapiens)
GSE262515	RNA-seq	21	Illumina HiSeq 2500 (Homo sapiens);Illumina HiSeq 2500 (Mus musculus)
GSE110345	RNA-seq	4	Illumina HiSeq 2500 (Homo sapiens)
C GSE131257	ATAC-seq;RNA-seq	19	Illumina HiSeq 2500 (Homo sapiens)
GSE94660	RNA-seq	42	Illumina HiSeq 2500 (Homo sapiens)

Genome binding/occupancy profiling

When the gene can detect a peak in the dataset, a peak plot will be displayed.

> Dataset: GSE35465 - VIT peak across samples
Peak Plot
> Dataset: GSE68402 - VIT peak across samples
Peak Plot
> Dataset: GSE270130 - VIT peak across samples
Peak Plot
> Dataset: GSE100400 - VIT peak across samples
Peak Plot
> Dataset: GSE131257 - VIT peak across samples
Peak Plot