HBV Target gene Detail Information

> WDR45B Gene Search Result


Gene Information
Gene Name WDR45B
Gene ID 56270
Gene Full Name WD repeat domain 45B
Gene Alias NEDSBAS|WDR45L|WIPI-3|WIPI3
Transcripts ENSG00000141580
Virus HBV
Gene Type protein-coding
HPA Location Info Golgi apparatus;Nucleoplasm, Cytosol;
Membrane Info Disease related genes, Human disease related genes, Predicted intracellular proteins
Uniport_ID Q5MNZ6
HGNC ID HGNC:25072
OMIM ID 609226
Summary This gene encodes a member of the WIPI or SVP1 family of WD40 repeat-containing proteins. The protein contains seven WD40 repeats that are thought to fold into a beta-propeller structure that mediates protein-protein interactions, and a conserved motif for interaction with phospholipids. The human genome contains several pseudogenes of this gene. [provided by RefSeq, Jul 2008]
Target gene [WDR45B] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1012553 chr17 6 0 0 6 View
1021516 chr17 61 9 2 72 View
1021517 chr17 6 0 0 6 View
1041202 chr17 63 390 55 508 View
1041203 chr17 63 389 56 508 View
1041204 chr17 63 389 56 508 View
1041205 chr17 63 389 56 508 View
1041206 chr17 63 389 55 507 View
1042295 chr17 114 13 3 130 View

Target gene [WDR45B] related to Omics data
Data ID Experiment type Sample number Platform
GSE236281 RNA-seq 12 Illumina MiSeq (Homo sapiens)
C
  GSE35465 		Chip-seq;RNA-seq 6 Illumina HiSeq 2000 (Homo sapiens)
GSE199850 scRNA-seq 1 HiSeq X Ten (Homo sapiens)
C
  GSE68402 		Chip-seq 26 Illumina MiSeq (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens)
GSE247322 scRNA-seq 27 Illumina NovaSeq 6000 (Homo sapiens)
TCGA_LIHC_HBV DNA methylation sequencing;RNA-seq 97 TCGA
C
  GSE270130 		Chip-seq 27 Illumina NovaSeq 6000 (Homo sapiens)
GSE224901 RNA-seq 21 Illumina NovaSeq 6000 (Homo sapiens)
GSE100400 Chip-seq;RNA-seq;4C_cccDNA 31 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)
GSE173897 RNA-seq 95 Illumina HiSeq 4000 (Homo sapiens)
GSE262515 RNA-seq 21 Illumina HiSeq 2500 (Homo sapiens);Illumina HiSeq 2500 (Mus musculus)
GSE110345 RNA-seq 4 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE131257 		ATAC-seq;RNA-seq 19 Illumina HiSeq 2500 (Homo sapiens)
GSE94660 RNA-seq 42 Illumina HiSeq 2500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE35465 - WDR45B peak across samples

Peak Plot

> Dataset: GSE68402 - WDR45B peak across samples

Peak Plot

> Dataset: GSE270130 - WDR45B peak across samples

Peak Plot

> Dataset: GSE131257 - WDR45B peak across samples

Peak Plot