HBV Target gene Detail Information

> ZNRF1 Gene Search Result


Gene Information
Gene Name ZNRF1
Gene ID 84937
Gene Full Name zinc and ring finger 1
Gene Alias NIN283
Transcripts ENSG00000186187
Virus HBV
Gene Type protein-coding
HPA Location Info Vesicles, Primary cilium transition zone;Primary cilium tip;
Membrane Info Enzymes, Metabolic proteins, Predicted intracellular proteins
Uniport_ID Q8ND25
HGNC ID HGNC:18452
OMIM ID 612060
Summary This gene encodes an E3 ubiquitin-protein ligase that plays a role in neural-cell differentiation. Overexpression of this gene causes neurite-like elongation. The encoded protein contains both a zinc finger and a RING finger motif and is localized in the endosome/lysosome compartment, indicating that it may be involved in ubiquitin-mediated protein modification, and in synaptic vessicle membranes in neurons. [provided by RefSeq, Feb 2012]
Target gene [ZNRF1] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1039493 chr16 40 41 7 88 View
1039494 chr16 41 48 7 96 View
1039495 chr16 41 48 7 96 View
1039496 chr16 43 48 7 98 View
1039497 chr16 43 48 7 98 View
1039498 chr16 43 49 7 99 View
1039499 chr16 43 49 7 99 View
1039500 chr16 43 49 7 99 View
1039501 chr16 43 49 7 99 View
1039502 chr16 43 49 7 99 View
1039503 chr16 43 50 7 100 View
1039504 chr16 43 50 7 100 View

Target gene [ZNRF1] related to Omics data
Data ID Experiment type Sample number Platform
GSE236281 RNA-seq 12 Illumina MiSeq (Homo sapiens)
C
  GSE35465 		Chip-seq;RNA-seq 6 Illumina HiSeq 2000 (Homo sapiens)
C
  GSE68402 		Chip-seq 26 Illumina MiSeq (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens)
GSE247322 scRNA-seq 27 Illumina NovaSeq 6000 (Homo sapiens)
TCGA_LIHC_HBV DNA methylation sequencing;RNA-seq 97 TCGA
C
  GSE270130 		Chip-seq 27 Illumina NovaSeq 6000 (Homo sapiens)
GSE224901 RNA-seq 21 Illumina NovaSeq 6000 (Homo sapiens)
C
  GSE100400 		Chip-seq;RNA-seq;4C_cccDNA 31 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)
GSE173897 RNA-seq 95 Illumina HiSeq 4000 (Homo sapiens)
GSE262515 RNA-seq 21 Illumina HiSeq 2500 (Homo sapiens);Illumina HiSeq 2500 (Mus musculus)
GSE110345 RNA-seq 4 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE131257 		ATAC-seq;RNA-seq 19 Illumina HiSeq 2500 (Homo sapiens)
GSE94660 RNA-seq 42 Illumina HiSeq 2500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE35465 - ZNRF1 peak across samples

Peak Plot

> Dataset: GSE68402 - ZNRF1 peak across samples

Peak Plot

> Dataset: GSE270130 - ZNRF1 peak across samples

Peak Plot

> Dataset: GSE100400 - ZNRF1 peak across samples

Peak Plot

> Dataset: GSE131257 - ZNRF1 peak across samples

Peak Plot